ORF extraction#

The amino acid and nucleotide sequences of all ORFs identified with ORFtrack can be extracted easily with ORFget, a tool provided with ORFtrack. Particularly, ORFget enables the user to extract the sequences of all identified ORFs (c_CDS, noncoding intergenic, or noncoding overlapping ORFs), but also, those of a specific ORF category (e.g. only noncoding intergenic ORFs) or a combination of ORFs according to their annotations (e.g. noncoding intergenic ORFs and noncoding ORFs that overlap lncRNAs...). Different examples are detailed in the ORFget section.